Bioinformatics hardware

Description

We possess a 512-core server farm with a total of 4,448 gigaflops of computation power and 1.2 TB of aggregate RAM, as well as 100 TB of data storage, a 1 Gbps ethernet network and access to ASU Advanced Computing Center.

If you're unable to find a specific service in the table below, please contact facility staff to discuss a customized project. We're able to handle bioinformatics projects such as microarray analysis, GWAS, population genetics and genomics, and demultiplexing as well as biostatistics projects including machine learning and statistical learning application, power analysis, survival analysis, ANOVA, regression analysis, dimensional reduction, mixed model, and biomarker identification.

Techniques
  • analysis
  • sequencing
ASU Unit
Knowledge Enterprise
Rates
Service ASU rate Nonprofit/other academic rate Notes
Single-cell sequencing analysis  $300/sample  $400/sample  
RNA-sequencing - standard: transcript quantification/DEG analysis/pathway analysis

 $120/sample

 $120/sample

 
RNA-sequencing - novel transcripts: novel transcript quantification/DEG analysis/pathway analysis  $150/sample  $150/sample  
RNA-sequencing: dual RNA-seq  $135/sample  $135/sample  
Whole genome re-sequencing - variants calling: SNP/INDEL/SV/somatic/CNV/annotation

 $150/sample

 $150/sample

 
Denovo transcriptome assembly  $3,000/project  $3,000/project  
Denovo assembly of single prokaryotic species or single eukaryptic w/small genome size and genome annotation  $3,000/project  $3,000/project  
Metagenomics - WGS: taxonomical analysis/denovo genome assembly and annotation  $325/sample  $375/sample  
Microbiome sequencing demultiplexing

 $65/run

 $65/run

 
Microbiome 16S rRNA sequencing analysis

 $14/sample 
(1-20 samples)

$12/sample
(21-49 samples)

$10/sample
(50-280 samples)

 $14/sample 
(1-20 samples)

$12/sample 
(21-49 samples)

$10/sample 
(50-280 samples)

 
Targeted sequencing: variants calling and annotation

 $75/sample

 $75/sample

 
Whole-exome-sequencing - WES: Variants calling and annotation  $150/sample  $150/sample  
Demultiplexing and standard FastQ file generation for QC  $65/run  $65/run  
Customized bioinformatics and biostatistics analysis: microarray/GWAS/machine learning/population genetics/etc. $75/hour $75/hour Please contact us for customized services